GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| UCEC | cis | rs9815354 | 1 | rs1613759 | chr3:41906183 | ULK4 | chr3:41288091-42003660:- | 0.53 | 6.52 | 9.73E-10 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs1615243 | chr3:41965234 | ULK4 | chr3:41288091-42003660:- | -0.49 | -5.86 | 2.84E-8 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs1615543 | chr3:41906404 | ULK4 | chr3:41288091-42003660:- | 0.53 | 6.52 | 9.73E-10 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs1628874 | chr3:41955714 | ULK4 | chr3:41288091-42003660:- | -0.51 | -6.21 | 4.74E-9 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs1629460 | chr3:41927449 | ULK4 | chr3:41288091-42003660:- | -0.52 | -6.41 | 1.75E-9 | Diastolic blood pressure |
| UCEC | cis | rs1577917 | 1 | rs16876529 | chr6:86591202 | SNHG5 | chr6:86386726-86388451:- | -0.47 | -6.15 | 6.65E-9 | Response to antipsychotic treatment |
| UCEC | cis | rs9815354 | 1 | rs17061431 | chr3:41792655 | ULK4 | chr3:41288091-42003660:- | 0.49 | 5.86 | 2.82E-8 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs17062109 | chr3:41810364 | ULK4 | chr3:41288091-42003660:- | 0.5 | 5.61 | 9.2E-8 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs17063584 | chr3:41861463 | ULK4 | chr3:41288091-42003660:- | 0.45 | 5.21 | 6.03E-7 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs17063599 | chr3:41861676 | ULK4 | chr3:41288091-42003660:- | 0.45 | 5.21 | 6.03E-7 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs17063649 | chr3:41863406 | ULK4 | chr3:41288091-42003660:- | 0.45 | 5.21 | 6.03E-7 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs17064124 | chr3:41890803 | ULK4 | chr3:41288091-42003660:- | 0.52 | 6.25 | 3.94E-9 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs1716642 | chr3:41965865 | ULK4 | chr3:41288091-42003660:- | -0.49 | -5.86 | 2.84E-8 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs1716644 | chr3:41968028 | ULK4 | chr3:41288091-42003660:- | -0.4 | -4.77 | 4.27E-6 | Diastolic blood pressure |
| UCEC | cis | rs9815354 | 1 | rs1716651 | chr3:41975099 | ULK4 | chr3:41288091-42003660:- | -0.49 | -5.86 | 2.84E-8 | Diastolic blood pressure |